ssahaSNP | Tool name | ssahaSNP |
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| URL | http://www.sanger.ac.uk/resources/software/ssahasnp/ |
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| Important features | Polymorphism detection tool. Detects homozygous SNPs and indels by aligning shotgun reads to the finished genome sequence. |
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| Citations | |
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| Year of publication | Not available |
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| Rank by usage frequency | 100 |
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| Comments | |
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| Function | SNP discovery, Indel discovery |
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| Category | Downloadable |
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| License | |
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| Status | |
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| Input file format | FASTA files for reference, FASTQ |
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| Output file format | |
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| Operating system |
Mac OS X, Linux 64, Linux, Solaris, Compaq Alpha |
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| Platform | |
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| Maintained by | Wellcome Trust Sanger Institute
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| Downloadable file format | |
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| Submission file format | |
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