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Categories of resources
Post-analysis categorization
Literature search
Post-survey categorization
Features validated in most cases
Gene expression
MicroRNA
Pathways
Primer designing
Protein-protein interactions (commonly used resources)
Protein structure prediction
SNP analysis
Features not validated
Alternative splice form analysis
DNA motif detection
Microbiology
Multiple sequence alignment
Next generation sequencing
Simple lists
Carbohydrates
Gene ID conversion
Lipids
Promoter prediction
Protein-protein interactions (all resources)
RNA structure prediction
SNP analysis
Preliminary lists
Antibodies
Biomarkers
Cell lines
Clinical trials
DNA/RNA structures
Disease-gene relationships
Enzymes
Functional analysis
Gene Ontology specific analysis
Gene/protein unified information
Genetics
Genomes and Genomics
Mass spectrometry
Microarray data analysis
Molecular docking
Nomenclature
Organelles
Orthologs
Pharmacokinetics and toxicology
Phylogeny/Taxonomy
Protein domains
Protein localization
Protein-nucleic acid interactions
Secretome
Small molecules
Spectral analysis
Text-mining
Transcription factors and binding sites
Suggested Readings
Basic concepts
Broad reviews
Other reviews
Case studies
Comparison of resources
Intuitive browsing
Multi-level categories
Alphabetical list
Category-wise alphabetical list
    All resources
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1
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Total Resource - 433
A cSNP Map and Database for Human Chromosome 21
A&HCI (Arts & Humanities Citation Index)
AACODS (Authority, Accuracy, Coverage, Objectivity, Date and Significance)
AANT
- Amino Acid-Nucleotide Interaction Database
ABA
- A-Bruijn Alignment
ABADV- Allen Brain Atlas-Driven Visualizations
AbDesigner
AbMiner
Abysis
Academic Search Complete
Academic Search Premier
Accelrys
ACE
- Africa Centre for Evidence
ACEScan
ACS
- American Chemical Society
ActiTrack
ADAM
ADAPT II
Addis Ababa digital library
adegenet 1.3-1
ADiR
- Assembler for Di-base Reads
ADME-AP
- Absorption, Distribution, Metabolism, Excretion -Associated Protein
ADVICE
- Automated Detection and Validation of Interaction by Co-Evolution
AERD
- Antibody/Epitope Registry database
AFND
- Allele Frequency Net Database
African Index Medicus
African online archives
AgBase
AgDB
- Ashbya Genome Database
AGEMAP -Atlas of Gene Expression in Mouse Aging Project
aGeneApart
agReg-SNPdb-Plants
AGRICOLA
- AGRICultural OnLine Access
AHOD - Australian HIV Observational Database
AIM (African Index Medicus)
Airiti Library
AJOL
- African Journals Online
ALE-HAS
Alexa-Seq
- Alternative Expression Analysis By RNA Sequencing
Algal Functional Annotation Tool
AliBaba
Align-m
AliGraf
- Graphical Image of Alignment
ALLERGEN NOMENCLATURE
AllerTOP v 2.0
ALOHOMORA
Alt Splice db
AltAnalyze
Alternative Splicing Detection Tool (ASDT)
AltTrans DB
aMAZE
AMED (Allied and Complementary Medicine Database)
AMEN-Annotation, Mapping, Expression and Network
AMIGene
- Annotation of MIcrobial Genes
AMPHORA
AMSTAR
- A MeaSurement Tool to Assess Systematic Reviews
AMSTAR 2 (A MeaSurement Tool to Assess systematic Reviews 2)
AMSTAR2 tool
Anchored DIALIGN
angaGEDUCI
- Anopheles gambiae Gene Expression Database at UC Irvine
Animal-SNPAtlas
AnimalTFDB2
ANNOVAR
Anti-cancer agent mechanism database
Antibody directory
Antibodypedia
ANTIMIC
- A Database of Antimicrobial Peptides Sequences
ANZCTR
- Australian New Zealand Clinical Trials Registry
APA PsycINFO
- American Psychological Association Psychological Information Database
APA scan
AphidBase
ApiESTDB
Applied clinical trials online
Arabidopsis Co-Expression Tool (ACT)
AraCyc
ArboDraw
ArcGIS software 10.5.1
ArchDB
Argonaute database
ARNIE
- AVEXIS Receptor Network with Integrated Expression
Array Studio
ArrayExpress
ArrayLeaRNA
ArrayOU
ArrayProspector
arraySCOUT
ArrayWiki
ARTS
ARUP Utah db
AS-ALPS
- Alternative Splicing Induced Alteration of Protein Structure
ASAP ( Alternative Splicing Annotation Project)
ASCancer Atlas DB
ASDB
- Alternative Splicing Database
ASES tool
ASGAL (Alternative Splicing Graph ALigner)
ASHESdb
ASIP
- Alternative Splicing in Plants
AsMamDB
ASmiR db
ASNP db
AspAlt tool
ASpediaFI DB
ASPic
- Alternative Splicing Prediction
ASPicDB
- Alterenative Splicing Prediction database
Asprofile
ASSESS
- Analysis of Sample Set Enrichment Scores
AssociationViewer
Astalavista
- Alternative splicing transcriptional landscape visualization tool
Asterias
ASTRA
- Alternative Splicing and TRanscription Archives
atBioNet
ATDB 2.0
- The Animal Toxin DataBase 2.0
Athamap colocalisation
ATHENA- Analysis Tool for Heritable and Environmental Network Associations
ATLAS.ti version 8.4.4Â
AtPID
AtRTD3 (Arabidopsis thaliana Reference Transcript Database3)
ATTED-II
- Arabidopsis thaliana trans-factor and cis-element prediction database
AuPosSOM
Australian Coordinating Registry
AutoDock
- Automated Docking
AutoPSI
AutoSNPdb
Avadis NGS
AVID
- Annotation Via Integration of Data
AVMA
- American Veterinary Medical Association
AYB
 British Nursing Index
 Chinese Clinical Trial Registry
 Cochran's Q statistics
 EBSCOhost Africa-Wide Information
 EconPapers
 Global Health databases
 Ichushi-Web
 ISI Web of Science
 Myanmar Central Biomedical Library
 ProQuest
 R 4.4.1
 R softwareÂ
 RevMan version 5.4Â
 Sinomed
 Stata 13.1
 STATA version 20.1Â
 Western Pacific Region Index Medicus (WPRIM)
 World Health Organization Global Measles and Rubella Laboratory Network (GMRLN)
A SNP resource and a genetic linkage map for Atlantic cod (Gadus morhua)
A-MADMAN
- Annotation-based MicroArray DataMeta ANalysis tool
AACODS (Authority, Accuracy, Coverage, Objectivity, Date and Significance)Â
AB Large Indel Tool
ABAC database
abcam®
- discover more
ABLas software
ABRicate
- Anti-Biotic Resistance
ABySS
- Assembly By Short Sequences
Academic Search Elite
Academic Search Ultimate
Accurate
Ace-it- Array CGH Expression integration tool
AceView
acslXtreme
ACToR
- Aggregated Computational Toxicology Resource
Adamant
ADB
- Asian Development Bank
ADDock
ADGO
ADME
- Absorption, Distribution, Metabolism, Excretion database (by aureus sciences)
ADMEDB by FUJITSU
aeGEPUCI
AffyMAPSDetector
Africa CDC (Africa Centres for Disease Control and Prevention)
African Index Medicus databasesÂ
African-Wide Information
AgBase
- AgricultureBase database
AgdbNet
- antigen sequence database
AgenDA
- Alignment based Gene Detection Algorithm
AGILE
- AliGnIng Long rEads
AGRICOLA (AGRICultural OnLine Access)
AHM
- African Health Monitor
AHRQ (Agency for Healthcare Research and Quality) tool
AIM
- Atal Innovation Mission
AJOL
- African Journals Online
Alamut software
ALEXA-seq
ALFRED
AlgPred 2.0
- Allergen Prediction (Version 2.0)
Alibee
Alignace
AliView v1.28
- Alignment Viewer and Editor
AllergenFP v.1.0
- Allergenicity FingerPrint
Allied and Complementary Medicine Database (AMED)Â
Alt Event Finder
Alt tox.org
Alternative Exon Database
Alternative Splicing Effects ASsessment Tools (AS-EAST)
AMADA
Amborella Genome Database
AMED
- Allied and Complementary Medicine Database
AMIA
- Automated Microarray Image Analysis Toolbox for MATLAB
AMOS
- A Modular Open Source whole genome assembler
AMPK signaling pathway
AMSTAR (A MeaSurement Tool to Assess systematic Reviews)
AMSTAR tool (A MeaSurement Tool to Assess systematic Reviews)
AncestrySNPminer
ANEXdb
Animal Genome Database
AnimalTFDB
Annotation-Modules
Antagomirbase
Antibiotic Kinetics©
Antibody Resource
ANTIGENpro
ANTISTAPHYBASE
APA PsycArticles
- American Psychological Association PsycArticles
APA PsycInfo
- Ovid
APADB
APID/APIN
- Agile Protein Interaction DataAnalyzer
APIS
APPRIS
Arabidopsis MPSS
ARALIPmutantDB
ArcGIS
ArcGIS software 10.5.1Â
Arctic Health
ARMADA
- Automated Robust Microarray Data Analysis
ARPIR software
Array-Pro Analyzer
- Microarray analysis software for fast, accurate and repeatable results
ArrayExpressHTS
ArrayMiner
- Powerful analysis tool for your microarray gene expression data
ArrayPipe
ArrayProspestor
ArrayTrack
ArrayXPath
Arts & Humanities Citation Index (A&HCI)
arXiv
AS-CMC
ASAP II
ASD
ASE database
ASFinder
ASGS
AsiDesigner
ASIP(Alternative Splicing in Plants)
ASMD
ASmodeler
ASP (Alternatively Spliced Protein forms)
ASpedia
AspGD
- Aspergillus Genome Database
ASPicDB
ASpli software
ASRG
- ArabidopsisSplicing Related Genes
ASSIA
- Applied Social Sciences Index and Abstracts
ASSP
ASTD (Alternative Splicing Transcript Diversity)
ASTK
ASTRAL
AtCAST3
ATGCs
- Alignable Tight Genomic Clusters
Athamap gene analysis
Atlas-Indel2
AtNAGNAG DB
AtPID
- Arabidopsis thaliana Protein Interactome Database
atSNP
Attie Lab Diabetes Database
AUREA- Adaptive Unified Relative Expression Analyzer
Australian Indigenous HealthInfoNet
AutoDock Vina
AutoQSAR
- Automated Quantitative Structure-Activity Relationship
AVA
- Amplicon Variant Analyzer
AVATAR
AVIS
- AJAX viewer of interactive signaling networks
Axeldb or Xenbase
Azorange
 CAB Abstracts (Ovid interface)
 Chongqing VIP
 Cochrane Library databases
 EBSCOhost Africa-Wide Information
 FluNet
 Health Management Information Consortium
 Ichushi-Web ( Japan Medical Abstracts Society Database)
 LexisNexis databases
 Ovid
 ProQuest DissertationsÂ
 R 4.4.3Â
 R-Package
 RStudio, version 4.2.0
 StArt (State of the Art through Systematic Review)
 Stata 15.1
 statistical software R-4.3.1.
 WIPO (World Intellectual Property Organization)
A SNP resource for dissection of phenotypic and genetic variation in Pacific white shrimp (Litopenaeus vannamei)
A4-Adaptive Automated Annotation
AAIR
AB Small Indel Tool
ABACAS
- Algorithm Based Automatic Contiguation of Assembled Sequences
ABCpred
- Artificial B-Cell Epitope Prediction server
ABMapper
ABS
Academic Oxford Journals
Academic Search Elite.
Academic Search Ultimate,
ACCUSA
Aceprimer
ACI (ASEAN Citation Index)
ACT
- Arabidopsis Co-Expression Tool
AD-gene curated database
ADAN
- Prediction of protein-protein interActions of moDular domAiNs
ADDA
- Automatic Domain Decomposition Algorithm
ADDPLAN
ADHESOMEFANetwork
ADME
- Absorption, Distribution, Metabolism, Excretion databases (by UCSD)
admetSAR
AEI
- Australian Education Index
Affymate
Africa-Wide Information
African Journals Online
AgAbDb
- Antigen Antibody Interactions Database
AGD
- Ashbya Genome Database
AGE
- Alignment with Gap Excision
Agene
agReg-SNPdb
Agricola (in ProQuest)
AHMII
- Agent to Help Microbial Information Integration
AIDA array
AIR (Annotation Integrated Resource) tool
AJOL (African Journals OnLine)
Alcovna
- Algorithms for Comparing and Vizualizing Non Assembled data
ALEXA-Seq
- ALternative EXpression Analysis
Algal Function Annotation tool
Ali Baba
- PubMed as a Graph
AliComp
- Alignments Comparison
AlignACE
Allegro
Allermatchâ„¢
ALLPATHS
Alt Event Finder tool
Alta Cyclic
Alternative Splicing Assembler (ASA)
Alternative Splicing Gallery (ASG)
Amadeus
AMDA
- Automated Microarray Data Analysis
AMEN
- Annotation, Mapping, Expression and Network
AMIADA
- Analysing MIcroArray Data
AMP
- Automated Microarray Pipeline
Amplicon
AMSTAR 2 (A Measurement Tool to Assess Systematic Reviews 2)
AMSTAR-2
ANCHOR
angaGEDuCI
Animal Genome Size Database
AnimalTFDB
- Animal Transcription Factor DataBase
AnnotationTools
Anthropology Plus
Antibodies Online
Antibody validation database
AntiJen
Antiviral databasesÂ
APA PsycINFO (Ovid)
APA PsycNET
- American Psychological Association PsycNET
APD2
- antimicrobial peptide database
APID2NET
APK©
- Adult and Pediatric Kinetics
APPRIS database
Arabidopsis Reactome
AraNet
- Probabilistic Functional Gene Network of Arabidopsis thaliana
ArcGIS 10.8
ArcGIS software version 10.0Â
Argonaute
aRNApipe tool
Array Designer
ArrayCluster
ArrayFox
ArrayMining
- Online Microarray Data Mining
Arrayplot
ArrayQuest
- An online DNA microarray analysis system
ArrayVision
ArrayXpath
ARTS
- Alignment of RNA Tertiary Structures
AS-ALPS (alternative splicing-induced alteration of protein structure)
AS-Quant (Alternative Splicing Quantitation)
ASAP II
- Alternative Splicing Annotation Project
ASDB
ASePCR
asg
- Alternative Splicing Gallery
ASGS
- Alternatively Splicing Graph server
ASimulatoR
ASlive
ASMD
- Alternative Splicing Mutation Database
ASNEO DB
AspAlt
ASpedia-R
ASPIC
ASPicDB (Alternative Splicing Prediction Database)
ASPNs db
ASRP- Arabidopsis Small RNA Project Database
ASSIsT
ASTALAVISTA (alternative splicing transcriptional landscape visualization tool)
ASTER spectral library
ASTool
AStrap db
ATCC
- American Type Culture Collection
AtGenExpress
Athena
- Arabidopsis thaliana expression network analysis
Atlas-SNP2
ATOME
AtPIN
- Arabidopsis thaliana protein interaction network
ATTED-II
Augustus
Australian cancer trials
AutoDock
AutoPrime
AutoSNPa
AVA
- Array Visual Analyzer
Avian Genomes
AVISPA
AXIS (Appraisal tool for Cross-Sectional Studies)
 AMSTAR2 tool
 ChiCTRÂ
 Chongqing VIP,
 EBSCO
 EBSCOÂ
 GenBank databases
 IBM MarketScan Research database
 ILO database (International Labour Organization)
 LILACS (Literatura Latino-Americana e do Caribe em Ciências da Saúde / Latin American and Caribbean Health Sciences Literature)
 ProQuest
 R 3.5.1
 R programming language (R4.2.1).
 Research Gate
 Russian database eLibrary.ru.
 STATA 11
 STATA software version
 TRIP
 World Health Organization (WHO)
 
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copyright © Dr. Kshitish Acharya K; all rights reserved