galign | Tool name | galign |
|---|
| URL | http://shahamlab.rockefeller.edu/galign |
|---|
| Important features | 1. Used for SNP discovery.
2. Has alignment method, SNP search, deletion search, simple SNP, Format convert, genome assemble, identifies polymorphisms between sequence reads obtained using Illumina/Solexa technology and a reference genome. |
|---|
| Citations | Shaham S. galign: a tool for rapid genome polymorphism discovery. PLoS One. 2009 Sep 25; 4(9):e7188. PubMed PMID: 19779626; PubMed Central PMCID: PMC2746318 |
|---|
| Year of publication | 2009 |
|---|
| Rank by usage frequency | 100 |
|---|
| Comments | |
|---|
| Function | SNP discovery |
|---|
| Category | Free, Downloadable |
|---|
| License | GPL |
|---|
| Status | |
|---|
| Input file format | |
|---|
| Output file format | text file |
|---|
| Operating system | MacOSX Intel |
|---|
| Operating language | |
|---|
| Platform | Illumina/Solexa |
|---|
| Maintained by | |
|---|
| Downloadable file format | |
|---|
| Submission file format | |
|---|
| |
