RSEM - RNA Seq by Expectation Maximization | Tool name | RSEM - RNA Seq by Expectation Maximization |
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| URL | http://deweylab.biostat.wisc.edu/rsem/ |
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| Important features | 1. It estimates quantity of RNA seq data and gene expression level.
2. It makes use of single-end and paired-end data. |
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| Citations | Li B, Ruotti V, Stewart RM, Thomson JA, Dewey CN. RNA-Seq gene expression estimation with read mapping uncertainty. Bioinformatics. 2010 Feb 15;26(4):493-500. Epub 2009 Dec 18. PubMed PMID: 20022975; PubMed Central PMCID:
PMC2820677. |
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| Year of publication | 2010 |
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| Rank by usage frequency | 100 |
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| Comments | |
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| Function | RNA seq alignment, RNA seq analysis |
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| Category | Free, Downloadable |
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| License | GNU GPL |
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| Operating language | C++ |
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| Maintained by | Bo Li, Deweylab |
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