PeakSeq | Tool name | PeakSeq |
|---|
| URL | http://info.gersteinlab.org/PeakSeq |
|---|
| Important features | It is used to identify and rank the peak regions in chip seq analysis. |
|---|
| Citations | Rozowsky J, Euskirchen G, Auerbach RK, Zhang ZD, Gibson T, Bjornson R,Carriero N, Snyder M, Gerstein MB. PeakSeq enables systematic scoring of ChIP-seq
experiments relative to controls. Nat Biotechnol. 2009 Jan;27(1):66-75. Epub 2009 Jan 4. PubMed PMID: 19122651; PubMed Central PMCID: PMC2924752. |
|---|
| Year of publication | 2009 |
|---|
| Rank by usage frequency | 96 |
|---|
| Comments | |
|---|
| Function | ChIP seq analysis |
|---|
| Category | Free, Downloadable |
|---|
| License | |
|---|
| Status | |
|---|
| Input file format | |
|---|
| Output file format | |
|---|
| Operating system | |
|---|
| Operating language | C and Perl |
|---|
| Platform | Illumina/Solexa |
|---|
| Maintained by | |
|---|
| Downloadable file format | |
|---|
| Submission file format | |
|---|
| |