MapPER | Tool name | MapPER |
|---|
| URL | http://www.netlab.uky.edu/p/bioinfo/MapPER |
|---|
| Important features | 1. It is an integrated version of mapsplice pipeline.
2. It can work well with paired-end datasets. |
|---|
| Citations | Hu Y, Wang K, He X, Chiang DY, Prins JF, Liu J. A probabilistic framework for
aligning paired-end RNA-seq data. Bioinformatics. 2010 Aug 15;26(16):1950-7. Epub
2010 Jun 23. PubMed PMID: 20576625; PubMed Central PMCID: PMC2916723. |
|---|
| Year of publication | 2010 |
|---|
| Rank by usage frequency | 100 |
|---|
| Comments | |
|---|
| Function | RNA seq alignment |
|---|
| Category | Free, Downloadable |
|---|
| License | |
|---|
| Status | |
|---|
| Input file format | |
|---|
| Output file format | |
|---|
| Operating system | Ubuntu 9.04 (64-bit) |
|---|
| Operating language | |
|---|
| Platform | |
|---|
| Maintained by | |
|---|
| Downloadable file format | |
|---|
| Submission file format | |
|---|
| |
