G-Mo.R-Se -Gene MOdeling using RNA-Seq | Tool name | G-Mo.R-Se -Gene MOdeling using RNA-Seq |
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| URL | http://www.genoscope.cns.fr/externe/gmorse/ |
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| Important features | 1. It is used to build de novo genes from RNA seq data.
2. It is Gene Modelling using RNA Seq. |
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| Citations | Denoeud F, Aury JM, Da Silva C, Noel B, Rogier O, Delledonne M, Morgante M, Valle G, Wincker P, Scarpelli C, Jaillon O, Artiguenave F. Annotating genomes with massive-scale RNA sequencing. Genome Biol. 2008;9(12):R175. Epub 2008 Dec 16. PubMed PMID: 19087247; PubMed Central PMCID: PMC2646279.
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| Year of publication | 2008 |
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| Rank by usage frequency | 100 |
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| Comments | Still in development, but currently unstable version is available. |
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| Function | RNA seq alignment |
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| Category | Free, Downloadable |
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| License | |
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| Status | |
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| Input file format | FASTA, FASTQ |
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| Output file format | .soap format, FASTA, .coverage, GFF, GTF |
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| Operating system | Linux |
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| Operating language | Perl |
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