Next generation sequencing

Post-analysis categorization
- Literature search
Post-survey categorization
- Features validated in most cases
- Features not validated
Simple lists
Preliminary lists

Tool name

CLCbio Genomics

URL

http://www.clcbio.com/index.php?id=1243

Important features

1. Analyse genomic, transcriptomic, and epigenomic data. It is a command-line program. 2. Supports de novo assembly of paired-end data and hybrid assembly of multiple data types. 3. Handles short and long read assembly, as well as gapped and ungapped alignment.

Citations

Year of publication

Not available

Rank by usage frequency

100

Comments

Function

RNA seq alignment, De novo assembler, Reference assembler, Visualization, SNP discovery, Indel discovery, Software package