omiRas | Tool name | omiRas |
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| URL | http://tools.genxpro.net/omiras/. |
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| Important features | It gives static annotation results including length distribution, mapping,statistics, alignments and quantification tables for each library as well as lists of differentially expressed ncRNAs. |
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| Citations | MFCller S, Rycak L, Winter P, Kahl G, Koch I, Rotter B.omiRas: a Web server for differential expression analysis of miRNAs derived from small RNA-Seq data.Bioinformatics. 2013 Oct 15; 29(20):2651-2. doi: 10.1093/bioinformatics/btt457.PMID: 23946503 |
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| Year of publication | 2013 |
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| Rank by usage frequency | 100 |
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| Comments | |
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| Function | Find microRNA, FUNCTIONAL ANALYSIS, FUNCTIONAL ANALYSIS: annotation or classification, SPECIES: human, SPECIES: mouse, http://tools.genxpro.net/omiras/., It gives static annotation results including length distribution- mapping-statistics- alignments and quantification tables for each library as well as lists of differentially expressed ncRNAs., MFCller S- Rycak L- Winter P- Kahl G- Koch I- Rotter B.omiRas: a Web server for differential expression analysis of miRNAs derived from small RNA-Seq data.Bioinformatics. 2013 Oct 15; 29(20):2651-2. doi: 10.1093/bioinformatics/btt457.PMID: 23946503, 2013, 100, Online, Downloadable, Downloadable, The Web tool allows the user to submit raw sequencing data and results are presented as: (i) static annotation results including length distribution- mapping statistics- alignments and quantification tables for each library as well as lists of differentially expressed ncRNAs between conditions and (ii) an interactive network visualization of user-selected miRNAs and their target genes based on the combination of several miRNA-mRNA interaction databases., Find microRNA |
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