mirExplorer | Tool name | mirExplorer |
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| URL | http://biocenter.sysu.edu.cn/mir/ |
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| Important features | Computational tool comprising of two modules: mirExplorer- genome and mirExplorer-NGS which are used for genome scale identification of microRNAs and next generation sequencing data respectively. |
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| Citations | Guan DG, Liao JY, Qu ZH, Zhang Y, Qu LH. mirExplorer: Detecting microRNAs from
genome and next generation sequencing data using the AdaBoost method with
transition probability matrix and combined features. RNA Biol. 2011 Sep 1;8(5).
[Epub ahead of print] PubMed PMID: 21881406.
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| Year of publication | 2011 |
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| Rank by usage frequency | 100 |
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| Comments | To be validated |
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| Function | FIND microRNA: precursor, FIND microRNA: mature form, EXPERIMENTAL data analysis, http://biocenter.sysu.edu.cn/mir/, Computational tool comprising of two modules: mirExplorer- genome and mirExplorer-NGS which are used for genome scale identification of microRNAs and next generation sequencing data respectively., Guan DG- Liao JY- Qu ZH- Zhang Y- Qu LH. mirExplorer: Detecting microRNAs from
genome and next generation sequencing data using the AdaBoost method with
transition probability matrix and combined features. RNA Biol. 2011 Sep 1;8(5).
[Epub ahead of print] PubMed PMID: 21881406.
, 2011, 100, To be validated, Downloadable, Linux or Windows |
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