DIANA-LncBase | Tool name | DIANA-LncBase |
|---|
| URL | www.microrna.gr/LncBase |
|---|
| Important features | DIANA-LncBase hosts transcriptome-wide experimentally verified and computationally predicted miRNA recognition elements (MREs) on human and mouse lncRNAs. |
|---|
| Citations | Paraskevopoulou MD, Georgakilas G, Kostoulas N, Reczko M, Maragkakis M, Dalamagas TM,Hatzigeorgiou AG.Nucleic Acids Res. 2013 Jan;41(Database issue):D239-45. doi: 10.1093/nar/gks1246.PMID: 23193281 |
|---|
| Year of publication | 2013 |
|---|
| Rank by usage frequency | 100 |
|---|
| Comments | |
|---|
| Function | Find microRNA, FIND TARGET: pseudo and real, FUNCTIONAL ANALYSIS: regulation/ expression, FUNCTIONAL ANALYSIS: annotation or classification, SPECIES: human, SPECIES: rat , SPECIES: mouse, www.microrna.gr/LncBase, DIANA-LncBase hosts transcriptome-wide experimentally verified and computationally predicted miRNA recognition elements (MREs) on human and mouse lncRNAs., Paraskevopoulou MD- Georgakilas G- Kostoulas N- Reczko M- Maragkakis M- Dalamagas TM-Hatzigeorgiou AG.Nucleic Acids Res. 2013 Jan;41(Database issue):D239-45. doi: 10.1093/nar/gks1246.PMID: 23193281 , 2013, 100, Online, Downloadable, Online/ downloadable, Downloadable, DIANA-LncBase hosts detailed information for each miRNA96lncRNA pair- such as external links- graphic plots of transcripts92 genomic location- representation of the binding sites- lncRNA tissue expression as well as MREs conservation and prediction scores., Find microRNa |
|---|
| Category | |
|---|
| |
