CePred | Tool name | CePred |
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| URL | http://cmbi.bjmu.edu.cn/cepred/ |
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| Important features | Tool for determining the likelihood of expression of intronic microRNAs along with their host gene. |
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| Citations | Wang D, Lu M, Miao J, Li T, Wang E, Cui Q. Cepred: predicting the
co-expression patterns of the human intronic microRNAs with their host genes.
PLoS One. 2009;4(2):e4421. Epub 2009 Feb 10. PubMed PMID: 19204784 |
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| Year of publication | 2009 |
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| Rank by usage frequency | 100 |
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| Comments | |
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| Function | FUNCTIONAL ANALYSIS: regulation/ expression, SPECIES: human, http://cmbi.bjmu.edu.cn/cepred/, Tool for determining the likelihood of expression of intronic microRNAs along with their host gene. , Wang D- Lu M- Miao J- Li T- Wang E- Cui Q. Cepred: predicting the
co-expression patterns of the human intronic microRNAs with their host genes.
PLoS One. 2009;4(2):e4421. Epub 2009 Feb 10. PubMed PMID: 19204784, 2009, 100, Online/ downloadable , Linux or windows platform, I. SPECIES SUPPORTED INCLUDE: human II. QUERY OR INPUT DATA: the host gene- host intron- microRNA - identification of the microRNA : start and end sites. (The start and end sites of the host gene is the same as transcription start site and transcription end site) III. OUTPUT DATA: prediction details on whether the given microRNA is significantly co-expressed with its host gene. IV. ADDITIONAL INFORMATION: The obtained data can be used to identify the role of microRNA in disease - physiological processes- phenotype etc., Identify microRNA coding regions using integrated tools which combine one or more features or algorithms in the prediction process. |
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