GENSCAN | Tool name | GENSCAN |
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| URL | http://genes.mit.edu/GENSCAN.html |
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| Important features | Predicts the locations and exon-intron structures of genes in genomic sequences from a variety of organisms. |
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| Citations | Burge C, Karlin S. Prediction of complete gene structures in human genomic DNA. J Mol Biol. 1997 Apr 25;268(1):78-94. PubMed PMID: 9149143.
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| Year of publication | 1997 |
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| Rank by usage frequency | 100 |
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| Comments | 1) One can request for a local copy of program to process large number of sequences. 2) Also gives frame and phase information of exon. |
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| Function | Exon detail, Exon detail: number, Exon detail: start/end, Exon detail: length, Exon detail direct information, Predicted protein sequences, Species, Finds alternative splicing in Arabidopsis, Finds alternative splicing in other species |
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| Category | |
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| Input file format | Sequence in FASTA format |
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| Output file format | Tabular form |
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| Limitation | |
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