ChimerDB | Tool name | ChimerDB |
|---|
| URL | http://genome.ewha.ac.kr/ChimerDB/ |
|---|
| Important features | |
|---|
| Citations | Kim N, Kim P, Nam S, Shin S, Lee S. ChimerDB--a knowledgebase for fusion
sequences. Nucleic AcIDs Res. 2006 Jan 1;34(Database issue):D21-4. PubMed PMID:
16381848; PubMed Central PMCID: PMC1347382.
|
|---|
| Year of publication | 2006 |
|---|
| Rank by usage frequency | 100 |
|---|
| Comments | Url working, but gives error in result page as on 27th July 2012 |
|---|
| Function | Species, Finds alternative splicing in human, Finds alternative splicing in rat, Finds alternative splicing in mouse |
|---|
| Category | |
|---|
| Input file format | Gene, Gene pair, fusion transcript ID, chromosomal band, tissue type, transcript source(source database, abberation type), annotation source, alignment information ( class, number of exons for head and tail gene) |
|---|
| Output file format | |
|---|
| Limitation | |
|---|
| |
