AVATAR | Tool name | AVATAR |
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| URL | http://avatar.iecs.fcu.edu.tw/ |
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| Important features | |
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| Citations | Hsu FR, Chang HY, Lin YL, Tsai YT, Peng HL, Chen YT, Cheng CY, Shih MY, Liu
CH, Chen CF. AVATAR: a database for genome-wIDe alternative splicing event
detection using large scale ESTs and mRNAs. Bioinformation. 2005 Apr
22;1(1):16-8. PubMed PMID: 17597845; PubMed Central PMCID: PMC1891626. |
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| Year of publication | 2005 |
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| Rank by usage frequency | 100 |
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| Comments | URL not working as on 14 Dec 2012 |
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| Function | Species, Finds alternative splicing in human, Finds alternative splicing in rat, Finds alternative splicing in mouse, Finds alternative splicing in dog, Finds alternative splicing in other species |
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| Category | |
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| Input file format | gene names, number of Identified AS events in a gene, minimal number of ESTs supporting a splicing site,accession number, gene isoform, gene location, cytogenetic locations, chromosome number,selecting organism / species |
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| Output file format | |
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| Limitation | |
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