ASTRA - Alternative Splicing and TRanscription Archives | Tool name | ASTRA - Alternative Splicing and TRanscription Archives |
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| URL | http://alterna.cbrc.jp/ |
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| Important features | Database for identification of patterns of alternative splicing and transcriptional initiation. Exons introns structures of splice variants can be viewed on java applet. |
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| Citations | |
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| Year of publication | Not available |
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| Rank by usage frequency | 100 |
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| Comments | 1) Gene information includes Gene name, chromosome number, strand, position and number of patterns. 2) Sequence of gene can be downloaded. 3) Data of Alternative Splicing can also be downloaded. |
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| Function | Gene Information, Species, Finds alternative splicing in human, Finds alternative splicing in mouse, Finds alternative splicing in Arabidopsis, Finds alternative splicing in Drosophila, Finds alternative splicing in other species |
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| Category | |
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| Input file format | Splicing Type, chromosome number, Unigene cluster ID, Genbank accession, Gene Name, OMIM ID, Gene ontology and signature (can be searched using OR and AND options) |
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| Output file format | |
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| Limitation | |
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