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Categories of resources
Post-analysis categorization
Literature search
Post-survey categorization
Features validated in most cases
Gene expression
MicroRNA
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Primer designing
Protein-protein interactions (commonly used resources)
Protein structure prediction
Features not validated
Alternative splice form analysis
DNA motif detection
Microbiology
Multiple sequence alignment
Next generation sequencing
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Carbohydrates
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Lipids
Long non-coding RNA
piRNA
Promoter prediction
Protein-protein interactions (all resources)
RNA structure prediction
SNP analysis
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Antibodies
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Cell lines
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DNA/RNA structures
Disease-gene relationships
Enzymes
Functional analysis
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Gene/protein unified information
Genetics
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Mass spectrometry
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Molecular docking
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Pharmacokinetics and toxicology
Phylogeny/Taxonomy
Protein domains
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Protein-nucleic acid interactions
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Transcription factors and binding sites
Suggested Readings
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Broad reviews
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Case studies
Comparison of resources
Intuitive browsing
Multi-level categories
Alphabetical list
Primer designing
Case studies
Primer design for a prokaryotic differential display RT-PCR
Detection of specific polymerase chain reaction product by utilizing the 5 prime---> 3 prime exonuclease activity of Thermus aquaticus DNA polymerase
Multiplex detection of four pathogenic retroviruses using molecular beacons
Simple, sensitive, and specific detection of human immunodeficiency virus type 1 in clinical specimens by polymerase chain reaction with nested primers
Genotyping ocular strains of Chlamydia trachomatis by single-tube nested PCR
Methylation-specific PCR: a novel PCR assay for methylation status of CpG islands
Multiplex PCR design strategy used for the simultaneous amplification of 10 Y chromosome short tandem repeat (STR) loci
In situ PCR: protocols and applications
Amplification of human minisatellites by the polymerase chain reaction: towards DNA fingerprinting of single cells
Conservative fragments in bacterial 16S rRNA genes and primer design for 16S ribosomal DNA amplicons in metagenomic studies
Analysis of nonspecific DNA synthesis during in-situ PCR and solution-phase PCR
Rapid detection of Spanish (delta beta)zero-thalassemia deletion by polymerase chain reaction
RAPD and other PCR-based analyses of plant genomes using DNA extracted from small leaf disks
Optimization of long-distance PCR using a transposon-based model system
Multiplex automated primer extension analysis: simultaneous genotyping of several polymorphisms
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